EnhancerDB
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  3. rs59616545[chr6:33566287]
Enhancers that have rs59616545[chr6:33566287]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs59616545[chr6:33566287]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33566279 33566294 MEF2A JASPAR yes 101159097
chr6 33566280 33566295 MEF2C JASPAR yes 101159098
chr6 33566281 33566293 MEF2B JASPAR yes 101159099
chr6 33566281 33566293 MEF2D JASPAR yes 101159100
chr6 33566283 33566287 YY1 TRANSFAC yes 101159101
chr6 33566286 33566298 FOXI1 JASPAR yes 101159102
chr6 33566286 33566301 FOXP1 JASPAR yes 101159103
chr6 33566286 33566301 HNF1A JASPAR yes 101159104
chr6 33566287 33566299 FOXC2 JASPAR yes 101159105
chr6 33566287 33566299 MEF2D JASPAR yes 101159106
Genes associated with rs59616545[chr6:33566287], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More