EnhancerDB
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  3. rs59683461[chr12:50927522]
Enhancers that have rs59683461[chr12:50927522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs59683461[chr12:50927522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 21545031
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031199
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031200
chr12 50926670 50928957 ZNF274 GTRD no Liver (HepG2) 21545200
chr12 50926670 50928957 ZNF274 GTRD no Liver (HepG2) 108031381
chr12 50926922 50927571 ZNF274 GTRD no Liver (HepG2) 21545225
chr12 50926922 50927571 ZNF274 GTRD no Liver (HepG2) 108031408
chr12 50926968 50927582 ZNF274 GTRD no Bone Marrow (K562) 21545233
chr12 50926968 50927582 ZNF274 GTRD no Bone Marrow (K562) 108031416
chr12 50927517 50927526 HIC2 JASPAR yes 120839727
chr12 50927520 50927524 LFA1 TRANSFAC yes 120839728
Genes associated with rs59683461[chr12:50927522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More