EnhancerDB
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  3. rs597338[chr16:21519946]
Enhancers that have rs597338[chr16:21519946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs597338[chr16:21519946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21517696 21520928 ZNF143 GTRD no Epithelial (MCF-7) 21696289
chr16 21517773 21520957 ZNF143 GTRD no Epithelial (MCF-7) 21696290
chr16 21517820 21520797 ZNF274 GTRD no Bone Marrow (K562) 21696294
chr16 21518956 21519983 ZNF274 GTRD no Liver (HepG2) 21696342
chr16 21518996 21519949 ZNF274 GTRD no Bone Marrow (K562) 21696345
chr16 21519011 21520735 ZNF274 GTRD no Cervix (HeLa-S3) 21696349
chr16 21519042 21519955 ZNF274 GTRD no Bone Marrow (K562) 21696354
chr16 21519056 21520954 ZNF143 GTRD no Epithelial (MCF-7) 21696356
chr16 21519376 21521093 TCF7L2 GTRD no Colon (HCT116) 21696373
chr16 21519382 21522037 TCF7L2 GTRD no Colon (HCT116) 21696374
chr16 21519414 21521334 TCF7L2 GTRD no Colon (HCT116) 21696375
chr16 21519484 21521195 TCF7L2 GTRD no Colon (HCT116) 21696376
chr16 21519577 21519958 TCF7L2 GTRD no Colon (HCT116) 21696377
chr16 21519580 21519952 ZNF274 GTRD no Bone Marrow (K562) 21696378
chr16 21519580 21519958 ZNF274 GTRD no Bone Marrow (K562) 21696379
chr16 21519652 21521163 TCF7L2 GTRD no Colon (HCT116) 21696387
chr16 21519740 21521072 TCF7L2 GTRD no Colon (HCT116) 21696389
chr16 21519747 21521082 ZNF274 GTRD no Bone Marrow (K562) 21696390
chr16 21519783 21521094 TCF7L2 GTRD no Colon (HCT116) 21696391
chr16 21519836 21521062 TCF7L2 GTRD no Colon (HCT116) 21696392
Genes associated with rs597338[chr16:21519946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More