EnhancerDB
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  3. rs59742921[chr5:78056952]
Enhancers that have rs59742921[chr5:78056952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs59742921[chr5:78056952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78056949 78056964 TFAP2C JASPAR yes 63623023
chr5 78056950 78056961 TFAP2A JASPAR yes 63623024
chr5 78056950 78056961 TFAP2B JASPAR yes 63623025
chr5 78056950 78056961 TFAP2C JASPAR yes 63623026
chr5 78056951 78056960 TFAP2A JASPAR yes 63623027
Genes associated with rs59742921[chr5:78056952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More