EnhancerDB
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  3. rs59809996[chr1:54847055]
Enhancers that have rs59809996[chr1:54847055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs59809996[chr1:54847055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54847046 54847066 RREB1 JASPAR yes 28980459
chr1 54847052 54847067 FOXP1 JASPAR yes 28980460
chr1 54847053 54847068 FOXP1 JASPAR yes 28980461
chr1 54847054 54847069 FOXP1 JASPAR yes 28980462
chr1 54847054 54847075 IRF1 JASPAR yes 28980463
chr1 54847055 54847070 FOXP1 JASPAR yes 28980464
chr1 54847055 54847076 IRF1 JASPAR yes 28980465
Genes associated with rs59809996[chr1:54847055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More