EnhancerDB
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Enhancers that have rs59850614[chr12:52533668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs59850614[chr12:52533668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52533149 52533809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546279
chr12 52533282 52533738 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546280
chr12 52533424 52533714 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546289
chr12 52533452 52533811 ZNF143 GTRD no Epithelial (MCF-7) 21546291
chr12 52533611 52534406 ZNF143 GTRD no Epithelial (MCF-7) 21546292
chr12 52533664 52533679 HNF4G JASPAR yes 120920811
chr12 52533665 52533679 NR2F1 JASPAR yes 120920812
chr12 52533665 52533680 HNF4A JASPAR yes 120920813
Genes associated with rs59850614[chr12:52533668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More