EnhancerDB
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  3. rs59940027[chr1:22354659]
Enhancers that have rs59940027[chr1:22354659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22343446 22360375 enh116
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Stomach
Transcript factors that have rs59940027[chr1:22354659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22354646 22354661 MEF2C JASPAR yes 27339595
chr1 22354647 22354662 MEF2A JASPAR yes 27339596
chr1 22354648 22354660 MEF2A JASPAR yes 27339597
chr1 22354648 22354660 MEF2B JASPAR yes 27339598
chr1 22354648 22354660 MEF2D JASPAR yes 27339599
Genes associated with rs59940027[chr1:22354659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More