EnhancerDB
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  3. rs59949596[chr17:62969369]
Enhancers that have rs59949596[chr17:62969369]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs59949596[chr17:62969369]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62966518 62969728 ZBTB33 GTRD no Lung (A549) 21780368
chr17 62966542 62969569 ZNF143 GTRD no Epithelial (MCF-7) 21780369
chr17 62966602 62969622 AR GTRD no Prostate (PC-3) 21780373
chr17 62966730 62969435 ZBTB33 GTRD no Lung (A549) 21780379
chr17 62967925 62969679 ZBTB33 GTRD no Lung (A549) 21780400
chr17 62968176 62969404 ZNF274 GTRD no Bone Marrow (K562) 21780406
chr17 62968221 62969557 ZNF143 GTRD no Epithelial (MCF-7) 21780413
chr17 62968231 62969441 ZNF143 GTRD no Epithelial (MCF-7) 21780416
chr17 62968238 62969389 ZBTB33 GTRD no Lung (A549) 21780418
chr17 62968298 62969627 ZNF143 GTRD no Epithelial (MCF-7) 21780441
chr17 62968328 62969518 ZNF143 GTRD no Epithelial (MCF-7) 21780459
chr17 62969369 62969380 FOXB1 JASPAR yes 55333492
chr17 62969369 62969380 FOXC1 JASPAR yes 55333493
chr17 62969369 62969381 FOXC2 JASPAR yes 55333494
Genes associated with rs59949596[chr17:62969369], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More