EnhancerDB
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  3. rs59993246[chr19:13967297]
Enhancers that have rs59993246[chr19:13967297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs59993246[chr19:13967297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13965258 13967317 ZNF143 GTRD no Epithelial (MCF-7) 21852778
chr19 13965460 13967356 ZNF143 GTRD no Epithelial (MCF-7) 21852781
chr19 13967031 13967522 ZNF143 GTRD no Epithelial (MCF-7) 21852797
chr19 13967089 13967490 ZNF143 GTRD no Epithelial (MCF-7) 21852798
chr19 13967093 13967544 ZNF143 GTRD no Epithelial (MCF-7) 21852799
chr19 13967115 13967556 ZNF143 GTRD no Epithelial (MCF-7) 21852800
chr19 13967142 13967538 ZNF274 GTRD no Liver (HepG2) 21852801
chr19 13967146 13967455 ZNF274 GTRD no Liver (HepG2) 21852802
chr19 13967162 13967469 ZNF274 GTRD no Liver (HepG2) 21852803
chr19 13967172 13967610 ZNF143 GTRD no Epithelial (MCF-7) 21852804
chr19 13967187 13967487 ZNF274 GTRD no Liver (HepG2) 21852805
chr19 13967290 13967305 MEF2C JASPAR yes 112539317
chr19 13967291 13967306 MEF2A JASPAR yes 112539318
chr19 13967294 13967308 FOXF2 JASPAR yes 112539319
chr19 13967294 13967308 ONECUT2 JASPAR yes 112539320
chr19 13967294 13967308 ONECUT3 JASPAR yes 112539321
chr19 13967294 13967309 FOXP1 JASPAR yes 112539322
chr19 13967295 13967310 FOXA1 JASPAR yes 112539323
chr19 13967296 13967307 FOXB1 JASPAR yes 112539324
chr19 13967296 13967307 FOXC1 JASPAR yes 112539325
chr19 13967296 13967308 FOXC2 JASPAR yes 112539326
chr19 13967297 13967309 FOXI1 JASPAR yes 112539327
Genes associated with rs59993246[chr19:13967297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More