EnhancerDB
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  3. rs60041466[chr17:48290433]
Enhancers that have rs60041466[chr17:48290433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48279381 48302635 enh17216
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60041466[chr17:48290433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48289507 48291096 AR GTRD no Prostate (PC-3) 21769637
chr17 48289507 48291096 AR GTRD no Prostate (PC-3) 108270662
chr17 48290108 48290959 ZBTB33 GTRD no Lung (A549) 21769645
chr17 48290108 48290959 ZBTB33 GTRD no Lung (A549) 108270663
chr17 48290130 48290964 ZBTB33 GTRD no Lung (A549) 21769646
chr17 48290130 48290964 ZBTB33 GTRD no Lung (A549) 108270664
chr17 48290152 48290990 ZBTB33 GTRD no Lung (A549) 21769647
chr17 48290152 48290990 ZBTB33 GTRD no Lung (A549) 108270665
chr17 48290158 48290971 ZBTB33 GTRD no Lung (A549) 21769648
chr17 48290158 48290971 ZBTB33 GTRD no Lung (A549) 108270666
chr17 48290203 48290839 ZBTB33 GTRD no Lung (A549) 21769649
chr17 48290203 48290839 ZBTB33 GTRD no Lung (A549) 108270667
chr17 48290267 48290837 ZNF274 GTRD no Cervix (HeLa-S3) 108270668
chr17 48290268 48290990 ZBTB33 GTRD no Lung (A549) 21769650
chr17 48290268 48290990 ZBTB33 GTRD no Lung (A549) 108270669
chr17 48290274 48290934 ZBTB33 GTRD no Lung (A549) 21769651
chr17 48290274 48290934 ZBTB33 GTRD no Lung (A549) 108270670
chr17 48290305 48290792 ZBTB33 GTRD no Lung (A549) 21769652
chr17 48290305 48290792 ZBTB33 GTRD no Lung (A549) 108270671
chr17 48290306 48290827 ZBTB33 GTRD no Lung (A549) 21769653
chr17 48290306 48290827 ZBTB33 GTRD no Lung (A549) 108270672
chr17 48290333 48290781 CTCF UCSC Txn Factor no Conserved 108270673
chr17 48290344 48290601 SOX2 GTRD no Neural Stem Cells (H9) 108270674
chr17 48290358 48290973 ZBTB33 GTRD no Lung (A549) 21769654
chr17 48290358 48290973 ZBTB33 GTRD no Lung (A549) 108270675
chr17 48290379 48290888 ZBTB33 GTRD no Lung (A549) 21769655
chr17 48290379 48290888 ZBTB33 GTRD no Lung (A549) 108270676
chr17 48290388 48290748 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108270677
chr17 48290422 48291125 TCF7L2 GTRD no Colon (HCT116) 108270678
chr17 48290423 48290778 ZBTB33 GTRD no Lung (A549) 21769656
chr17 48290423 48290778 ZBTB33 GTRD no Lung (A549) 108270679
chr17 48290424 48290714 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108270680
chr17 48290428 48290443 MEF2C JASPAR yes 54687605
chr17 48290429 48290444 MEF2A JASPAR yes 54687606
chr17 48290431 48290446 FOXP1 JASPAR yes 54687607
chr17 48290432 48290438 TBP TRANSFAC yes 54687608
chr17 48290432 48290447 FOXP1 JASPAR yes 54687609
chr17 48290432 48290453 IRF1 JASPAR yes 54687610
chr17 48290432 48290708 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108270681
chr17 48290433 48290448 FOXP1 JASPAR yes 54687611
chr17 48290433 48290454 IRF1 JASPAR yes 54687612
Genes associated with rs60041466[chr17:48290433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More