EnhancerDB
  1. Home
  2. SNP
  3. rs60180004[chr12:92428558]
Enhancers that have rs60180004[chr12:92428558]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92419705 92433153 enh14877
Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Muscle (Myoblast) Breast Spleen Uterus Thymus Heart
chr12 92428496 92429133 vista14374
VISTA
Transcript factors that have rs60180004[chr12:92428558]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92428185 92428740 ZNF143 GTRD no Epithelial (MCF-7) 21561417
chr12 92428185 92428740 ZNF143 GTRD no Epithelial (MCF-7) 108049184
chr12 92428362 92428646 ZNF143 GTRD no Epithelial (MCF-7) 21561418
chr12 92428362 92428646 ZNF143 GTRD no Epithelial (MCF-7) 108049185
chr12 92428432 92428683 ZNF143 GTRD no Epithelial (MCF-7) 21561419
chr12 92428432 92428683 ZNF143 GTRD no Epithelial (MCF-7) 108049186
chr12 92428467 92429123 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21561420
chr12 92428467 92429123 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108049187
chr12 92428543 92428559 SOX8 JASPAR yes 82451021
chr12 92428543 92428559 SOX8 JASPAR yes 122728725
chr12 92428549 92428564 ZBTB33 JASPAR yes 82451024
chr12 92428549 92428564 ZBTB33 JASPAR yes 122728728
chr12 92428558 92428567 THAP1 JASPAR yes 82451025
chr12 92428558 92428567 THAP1 JASPAR yes 122728729
Genes associated with rs60180004[chr12:92428558], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More