EnhancerDB
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  3. rs60188130[chr11:65896061]
Enhancers that have rs60188130[chr11:65896061]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65889425 65921015 enh1832
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60188130[chr11:65896061]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65895205 65903996 ZNF274 GTRD no Bone Marrow (K562) 21496344
chr11 65895205 65903996 ZNF274 GTRD no Bone Marrow (K562) 107982361
chr11 65896047 65896062 HNF1A JASPAR yes 39353666
chr11 65896049 65896061 HNF1B JASPAR yes 39353667
chr11 65896054 65896065 HOXC13 JASPAR yes 39353668
chr11 65896054 65896069 SCRT1 JASPAR yes 39353669
Genes associated with rs60188130[chr11:65896061], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More