EnhancerDB
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  3. rs60274006[chr1:232767485]
Enhancers that have rs60274006[chr1:232767485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs60274006[chr1:232767485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232766395 232768366 AR GTRD no Prostate (PC-3) 21392313
chr1 232767298 232767737 TCF7L2 GTRD no Colon (HCT116) 21392317
chr1 232767321 232767770 ZNF143 GTRD no Epithelial (MCF-7) 21392318
chr1 232767348 232767859 ZNF143 GTRD no Epithelial (MCF-7) 21392319
chr1 232767437 232767848 TCF7L2 GTRD no Colon (HCT116) 21392320
chr1 232767480 232767491 E2F1 JASPAR yes 36179817
chr1 232767481 232767486 SP1 TRANSFAC yes 36179818
chr1 232767481 232767492 E2F4 JASPAR yes 36179819
chr1 232767481 232767492 E2F6 JASPAR yes 36179820
chr1 232767482 232767487 SP1 TRANSFAC yes 36179821
Genes associated with rs60274006[chr1:232767485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More