EnhancerDB
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  3. rs60279392[chr5:90597126]
Enhancers that have rs60279392[chr5:90597126]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60279392[chr5:90597126]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90597121 90597136 MEF2C JASPAR yes 64189917
chr5 90597124 90597139 FOXP1 JASPAR yes 64189918
chr5 90597125 90597131 TBP TRANSFAC yes 64189919
chr5 90597125 90597140 FOXP1 JASPAR yes 64189920
chr5 90597125 90597146 IRF1 JASPAR yes 64189921
chr5 90597126 90597141 FOXP1 JASPAR yes 64189922
Genes associated with rs60279392[chr5:90597126], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More