EnhancerDB
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  3. rs60424234[chr11:19986038]
Enhancers that have rs60424234[chr11:19986038]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs60424234[chr11:19986038]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19986026 19986047 IRF1 JASPAR yes 37820021
chr11 19986029 19986043 SPI1 JASPAR yes 37820022
chr11 19986029 19986043 SPIC JASPAR yes 37820023
chr11 19986032 19986053 IRF1 JASPAR yes 37820024
chr11 19986035 19986050 FOXP1 JASPAR yes 37820025
chr11 19986037 19986052 FOXP1 JASPAR yes 37820026
chr11 19986038 19986053 FOXP1 JASPAR yes 37820027
Genes associated with rs60424234[chr11:19986038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More