EnhancerDB
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  3. rs60499028[chr17:60169090]
Enhancers that have rs60499028[chr17:60169090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs60499028[chr17:60169090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60168362 60169797 TCF7L2 GTRD no Colon (HCT116) 21777688
chr17 60169087 60169102 FOXP1 JASPAR yes 55180771
chr17 60169088 60169103 FOXP1 JASPAR yes 55180772
chr17 60169089 60169104 FOXP1 JASPAR yes 55180773
chr17 60169089 60169110 IRF1 JASPAR yes 55180774
chr17 60169090 60169105 FOXP1 JASPAR yes 55180775
chr17 60169090 60169111 IRF1 JASPAR yes 55180776
Genes associated with rs60499028[chr17:60169090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More