EnhancerDB
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  3. rs60781953[chr1:8966349]
Enhancers that have rs60781953[chr1:8966349]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs60781953[chr1:8966349]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8966332 8966353 IRF1 JASPAR yes 26607117
chr1 8966336 8966357 IRF1 JASPAR yes 26607119
chr1 8966338 8966353 PRDM1 JASPAR yes 26607120
chr1 8966338 8966353 STAT2 JASPAR yes 26607121
chr1 8966339 8966353 SPIC JASPAR yes 26607122
chr1 8966339 8966353 STAT1 JASPAR yes 26607123
chr1 8966340 8966361 IRF1 JASPAR yes 26607124
chr1 8966341 8966356 FOXP1 JASPAR yes 26607125
chr1 8966341 8966362 IRF1 JASPAR yes 26607126
chr1 8966343 8966358 FOXP1 JASPAR yes 26607127
chr1 8966345 8966360 FOXP1 JASPAR yes 26607128
chr1 8966346 8966361 FOXP1 JASPAR yes 26607129
chr1 8966347 8966362 FOXP1 JASPAR yes 26607130
chr1 8966348 8966363 FOXP1 JASPAR yes 26607131
chr1 8966349 8966364 FOXP1 JASPAR yes 26607132
Genes associated with rs60781953[chr1:8966349], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More