EnhancerDB
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  3. rs60804399[chr2:38745165]
Enhancers that have rs60804399[chr2:38745165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38731025 38748315 enh5426
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung Blood (OCI-LY7) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Spleen Uterus Heart
Transcript factors that have rs60804399[chr2:38745165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38745152 38745167 FOXA1 JASPAR yes 73149154
chr2 38745153 38745165 FOXI1 JASPAR yes 73149155
chr2 38745154 38745166 FOXC2 JASPAR yes 73149156
chr2 38745154 38745168 ONECUT3 JASPAR yes 73149157
chr2 38745155 38745166 FOXB1 JASPAR yes 73149158
chr2 38745155 38745166 FOXC1 JASPAR yes 73149159
chr2 38745155 38745171 POU4F2 JASPAR yes 73149160
chr2 38745155 38745171 POU4F3 JASPAR yes 73149161
chr2 38745156 38745171 FOXA1 JASPAR yes 73149163
chr2 38745157 38745169 FOXI1 JASPAR yes 73149164
chr2 38745157 38745171 POU4F1 JASPAR yes 73149165
chr2 38745157 38745172 FOXP1 JASPAR yes 73149166
chr2 38745157 38745172 HNF1A JASPAR yes 73149167
chr2 38745158 38745170 FOXC2 JASPAR yes 73149168
chr2 38745158 38745172 ONECUT2 JASPAR yes 73149169
chr2 38745158 38745172 ONECUT3 JASPAR yes 73149170
chr2 38745159 38745170 FOXB1 JASPAR yes 73149171
chr2 38745159 38745170 FOXC1 JASPAR yes 73149172
chr2 38745159 38745170 PROP1 JASPAR yes 73149173
chr2 38745161 38745173 FOXI1 JASPAR yes 73149175
chr2 38745162 38745174 FOXC2 JASPAR yes 73149176
chr2 38745162 38745174 MEF2D JASPAR yes 73149177
chr2 38745164 38745168 YY1 TRANSFAC yes 73149178
Genes associated with rs60804399[chr2:38745165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More