EnhancerDB
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  3. rs60809509[chr16:85456065]
Enhancers that have rs60809509[chr16:85456065]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs60809509[chr16:85456065]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 21725378
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214476
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214477
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 21725385
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214478
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214479
chr16 85453063 85456595 ZNF143 GTRD no Epithelial (MCF-7) 21725395
chr16 85453063 85456595 ZNF143 GTRD no Epithelial (MCF-7) 108214480
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 21725460
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 108214481
chr16 85455014 85458001 ZNF143 GTRD no Epithelial (MCF-7) 21725461
chr16 85455014 85458001 ZNF143 GTRD no Epithelial (MCF-7) 108214482
chr16 85455373 85456675 ZNF274 GTRD no Bone Marrow (K562) 21725463
chr16 85455373 85456675 ZNF274 GTRD no Bone Marrow (K562) 108214483
chr16 85455392 85456417 ZNF274 GTRD no Bone Marrow (K562) 21725464
chr16 85455392 85456417 ZNF274 GTRD no Bone Marrow (K562) 108214484
chr16 85455443 85456105 ZNF274 GTRD no Bone Marrow (K562) 21725467
chr16 85455477 85456148 ZNF274 GTRD no Bone Marrow (K562) 21725468
chr16 85455482 85456778 TCF7L2 GTRD no Colon (HCT116) 21725469
chr16 85455482 85456778 TCF7L2 GTRD no Colon (HCT116) 108214485
chr16 85455482 85457011 TCF7L2 GTRD no Colon (HCT116) 21725470
chr16 85455482 85457011 TCF7L2 GTRD no Colon (HCT116) 108214486
chr16 85455569 85456607 TCF7L2 GTRD no Colon (HCT116) 21725472
chr16 85455569 85456607 TCF7L2 GTRD no Colon (HCT116) 108214487
chr16 85455874 85456244 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21725473
chr16 85455874 85456244 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214488
chr16 85455982 85460115 ZNF143 GTRD no Epithelial (MCF-7) 21725474
chr16 85455982 85460115 ZNF143 GTRD no Epithelial (MCF-7) 108214489
chr16 85455982 85460115 ZNF143 GTRD no Epithelial (MCF-7) 108214490
chr16 85456030 85465681 ZNF143 GTRD no Epithelial (MCF-7) 21725475
chr16 85456030 85465681 ZNF143 GTRD no Epithelial (MCF-7) 108214491
chr16 85456030 85465681 ZNF143 GTRD no Epithelial (MCF-7) 108214492
chr16 85456054 85456068 PLAG1 JASPAR yes 12059255
chr16 85456055 85456070 ZBTB33 JASPAR yes 12059256
chr16 85456059 85456073 GLIS2 JASPAR yes 12059257
chr16 85456060 85456071 E2F1 JASPAR yes 12059258
chr16 85456061 85456072 E2F4 JASPAR yes 12059259
chr16 85456061 85456072 E2F6 JASPAR yes 12059260
Genes associated with rs60809509[chr16:85456065], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More