EnhancerDB
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  3. rs60840469[chr19:13956447]
Enhancers that have rs60840469[chr19:13956447]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60840469[chr19:13956447]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13955441 13956851 ZNF143 GTRD no Epithelial (MCF-7) 21852243
chr19 13955441 13956851 ZNF143 GTRD no Epithelial (MCF-7) 108390188
chr19 13955484 13956974 ZNF143 GTRD no Epithelial (MCF-7) 21852246
chr19 13955484 13956974 ZNF143 GTRD no Epithelial (MCF-7) 108390191
chr19 13955562 13956783 ZNF143 GTRD no Epithelial (MCF-7) 21852252
chr19 13955562 13956783 ZNF143 GTRD no Epithelial (MCF-7) 108390197
chr19 13955589 13956537 TCF7L2 GTRD no Colon (HCT116) 21852254
chr19 13955589 13956537 TCF7L2 GTRD no Colon (HCT116) 108390199
chr19 13955593 13956452 TCF7L2 GTRD no Colon (HCT116) 21852255
chr19 13955657 13956865 ZNF143 GTRD no Epithelial (MCF-7) 21852257
chr19 13956231 13956617 TCF7L2 GTRD no Colon (HCT116) 21852259
chr19 13956281 13956542 ZNF143 GTRD no Epithelial (MCF-7) 21852260
chr19 13956319 13956810 ZNF274 GTRD no Bone Marrow (K562) 21852261
chr19 13956336 13956778 ZNF274 GTRD no Bone Marrow (K562) 21852262
chr19 13956435 13956450 MEF2A JASPAR yes 112537513
chr19 13956436 13956451 MEF2C JASPAR yes 112537514
chr19 13956437 13956449 MEF2A JASPAR yes 112537515
chr19 13956438 13956448 MEF2A JASPAR yes 112537516
Genes associated with rs60840469[chr19:13956447], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More