EnhancerDB
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  3. rs60870420[chr1:7609215]
Enhancers that have rs60870420[chr1:7609215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7605943 7624475 enh41
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs60870420[chr1:7609215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7608609 7609401 SOX2 GTRD no Neural Stem Cells (H9) 107801932
chr1 7609202 7609215 TFAP2A JASPAR yes 26475482
chr1 7609202 7609215 TFAP2B JASPAR yes 26475483
chr1 7609202 7609215 TFAP2C JASPAR yes 26475484
chr1 7609208 7609229 ZNF263 JASPAR yes 26475485
chr1 7609210 7609215 SP1 TRANSFAC yes 26475486
chr1 7609212 7609232 RREB1 JASPAR yes 26475487
Genes associated with rs60870420[chr1:7609215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More