EnhancerDB
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  3. rs60879548[chr17:25835735]
Enhancers that have rs60879548[chr17:25835735]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs60879548[chr17:25835735]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25835730 25835745 FOXP1 JASPAR yes 53638799
chr17 25835732 25835748 POU4F3 JASPAR yes 53638800
chr17 25835733 25835748 FOXA1 JASPAR yes 53638801
chr17 25835734 25835746 FOXI1 JASPAR yes 53638802
chr17 25835734 25835748 POU4F1 JASPAR yes 53638803
chr17 25835734 25835749 FOXP1 JASPAR yes 53638804
chr17 25835734 25835749 HNF1A JASPAR yes 53638805
chr17 25835735 25835747 FOXC2 JASPAR yes 53638806
chr17 25835735 25835749 ONECUT2 JASPAR yes 53638807
chr17 25835735 25835749 ONECUT3 JASPAR yes 53638808
Genes associated with rs60879548[chr17:25835735], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More