EnhancerDB
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  3. rs60887484[chr17:41523754]
Enhancers that have rs60887484[chr17:41523754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs60887484[chr17:41523754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520594 41525787 ZNF143 GTRD no Epithelial (MCF-7) 21760304
chr17 41520797 41523762 ZBTB33 GTRD no Lung (A549) 21760313
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41523013 41524154 AR GTRD no Prostate (PC-3) 21760400
chr17 41523363 41525123 ZNF143 GTRD no Epithelial (MCF-7) 21760403
chr17 41523419 41524927 ZNF143 GTRD no Epithelial (MCF-7) 21760404
chr17 41523503 41524516 ZNF274 GTRD no Cervix (HeLa-S3) 21760405
chr17 41523541 41524874 ZNF143 GTRD no Epithelial (MCF-7) 21760406
chr17 41523622 41524326 ZNF143 GTRD no Epithelial (MCF-7) 21760407
chr17 41523624 41525585 ZNF143 GTRD no Epithelial (MCF-7) 21760408
chr17 41523633 41524612 ZNF143 GTRD no Epithelial (MCF-7) 21760409
chr17 41523639 41524060 ZNF143 GTRD no Epithelial (MCF-7) 21760410
chr17 41523647 41525933 ZNF143 GTRD no Epithelial (MCF-7) 21760411
chr17 41523659 41525014 ZNF143 GTRD no Epithelial (MCF-7) 21760412
chr17 41523660 41526159 ZNF143 GTRD no Epithelial (MCF-7) 21760413
chr17 41523663 41525001 ZNF143 GTRD no Epithelial (MCF-7) 21760414
chr17 41523681 41524793 ZNF143 GTRD no Epithelial (MCF-7) 21760415
chr17 41523710 41524766 ZNF143 GTRD no Epithelial (MCF-7) 21760416
chr17 41523742 41523757 HNF1A JASPAR yes 54347489
chr17 41523746 41523761 HNF1A JASPAR yes 54347490
chr17 41523747 41523761 POU4F1 JASPAR yes 54347491
chr17 41523747 41523762 FOXA1 JASPAR yes 54347492
chr17 41523747 41523763 POU4F2 JASPAR yes 54347493
chr17 41523747 41523763 POU4F3 JASPAR yes 54347494
chr17 41523748 41523759 FOXB1 JASPAR yes 54347495
chr17 41523748 41523759 FOXC1 JASPAR yes 54347496
chr17 41523748 41523760 FOXC2 JASPAR yes 54347497
chr17 41523750 41523764 ONECUT2 JASPAR yes 54347498
chr17 41523750 41523764 ONECUT3 JASPAR yes 54347499
chr17 41523750 41523765 FOXP1 JASPAR yes 54347500
chr17 41523750 41523765 HNF1A JASPAR yes 54347501
chr17 41523751 41523765 POU4F1 JASPAR yes 54347502
chr17 41523751 41523766 FOXA1 JASPAR yes 54347503
chr17 41523751 41523767 POU4F2 JASPAR yes 54347504
chr17 41523751 41523767 POU4F3 JASPAR yes 54347505
chr17 41523752 41523763 FOXB1 JASPAR yes 54347506
chr17 41523752 41523763 FOXC1 JASPAR yes 54347507
chr17 41523752 41523763 PROP1 JASPAR yes 54347508
chr17 41523752 41523764 FOXC2 JASPAR yes 54347509
chr17 41523753 41523765 FOXI1 JASPAR yes 54347510
chr17 41523754 41523768 ONECUT2 JASPAR yes 54347511
chr17 41523754 41523768 ONECUT3 JASPAR yes 54347512
chr17 41523754 41523769 FOXP1 JASPAR yes 54347513
chr17 41523754 41523769 HNF1A JASPAR yes 54347514
Genes associated with rs60887484[chr17:41523754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More