EnhancerDB
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  3. rs60890797[chr19:13282601]
Enhancers that have rs60890797[chr19:13282601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs60890797[chr19:13282601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13282507 13282974 ZNF274 GTRD no Bone Marrow (K562) 21851407
chr19 13282581 13282602 IRF1 JASPAR yes 112515562
chr19 13282585 13282606 IRF1 JASPAR yes 112515563
chr19 13282587 13282602 PRDM1 JASPAR yes 112515564
chr19 13282587 13282602 STAT2 JASPAR yes 112515565
chr19 13282588 13282602 SPIC JASPAR yes 112515566
chr19 13282588 13282602 STAT1 JASPAR yes 112515567
chr19 13282589 13282603 IRF7 JASPAR yes 112515568
chr19 13282589 13282603 IRF8 JASPAR yes 112515569
chr19 13282589 13282604 IRF9 JASPAR yes 112515570
chr19 13282589 13282610 IRF1 JASPAR yes 112515571
chr19 13282590 13282605 FOXP1 JASPAR yes 112515572
chr19 13282590 13282611 IRF1 JASPAR yes 112515573
chr19 13282591 13282606 PRDM1 JASPAR yes 112515574
chr19 13282591 13282612 IRF1 JASPAR yes 112515575
chr19 13282596 13282611 FOXP1 JASPAR yes 112515576
chr19 13282598 13282613 FOXP1 JASPAR yes 112515577
chr19 13282600 13282615 FOXP1 JASPAR yes 112515578
Genes associated with rs60890797[chr19:13282601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More