EnhancerDB
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  3. rs60939601[chr3:57973270]
Enhancers that have rs60939601[chr3:57973270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs60939601[chr3:57973270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57973256 57973271 FOXP1 JASPAR yes 2661265
chr3 57973258 57973273 FOXP1 JASPAR yes 2661266
chr3 57973258 57973278 RREB1 JASPAR yes 2661267
chr3 57973258 57973279 IRF1 JASPAR yes 2661268
chr3 57973259 57973280 IRF1 JASPAR yes 2661269
chr3 57973264 57973285 IRF1 JASPAR yes 2661270
chr3 57973265 57973271 TCF4 TRANSFAC yes 2661271
chr3 57973265 57973280 FOXP1 JASPAR yes 2661272
chr3 57973266 57973277 FOXP2 JASPAR yes 2661273
chr3 57973266 57973278 FOXC2 JASPAR yes 2661274
Genes associated with rs60939601[chr3:57973270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More