EnhancerDB
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  3. rs60959325[chr1:27901012]
Enhancers that have rs60959325[chr1:27901012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs60959325[chr1:27901012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27900994 27901015 IRF1 JASPAR yes 27710979
chr1 27900998 27901012 STAT1 JASPAR yes 27710981
chr1 27900998 27901013 PRDM1 JASPAR yes 27710982
chr1 27900998 27901013 STAT2 JASPAR yes 27710983
chr1 27900998 27901016 IRF2 JASPAR yes 27710984
chr1 27901004 27901014 RELA JASPAR yes 27710985
chr1 27901007 27901021 PAX6 JASPAR yes 27710986
Genes associated with rs60959325[chr1:27901012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More