EnhancerDB
  1. Home
  2. SNP
  3. rs60965469[chr1:3246839]
Enhancers that have rs60965469[chr1:3246839]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 3244561 3248729 vista2
VISTA
Transcript factors that have rs60965469[chr1:3246839]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3246827 3246840 SMAD2 JASPAR yes 26280798
chr1 3246827 3246840 SMAD2 JASPAR yes 71117759
chr1 3246829 3246842 SMAD2 JASPAR yes 26280799
chr1 3246829 3246842 SMAD2 JASPAR yes 71117760
chr1 3246839 3246853 ZIC1 JASPAR yes 26280800
chr1 3246839 3246853 ZIC1 JASPAR yes 71117761
Genes associated with rs60965469[chr1:3246839], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More