EnhancerDB
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  3. rs61200585[chr6:42365520]
Enhancers that have rs61200585[chr6:42365520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42360825 42379595 enh9117
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs61200585[chr6:42365520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42365510 42365524 RXRB JASPAR yes 101717201
chr6 42365510 42365524 RXRG JASPAR yes 101717202
chr6 42365510 42365525 HNF4A JASPAR yes 101717203
chr6 42365515 42365528 NR2F1 JASPAR yes 101717205
chr6 42365519 42365523 ESR1 TRANSFAC yes 101717206
Genes associated with rs61200585[chr6:42365520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More