EnhancerDB
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  3. rs61325379[chr16:87890614]
Enhancers that have rs61325379[chr16:87890614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs61325379[chr16:87890614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87889898 87890673 TCF7L2 GTRD no Colon (HCT116) 21735319
chr16 87889898 87890673 TCF7L2 GTRD no Colon (HCT116) 108221423
chr16 87890604 87890614 SP1 JASPAR yes 12247982
chr16 87890608 87890619 TFAP2A JASPAR yes 12247985
chr16 87890608 87890619 TFAP2B JASPAR yes 12247986
chr16 87890608 87890619 TFAP2C JASPAR yes 12247987
chr16 87890609 87890618 TFAP2A JASPAR yes 12247988
Genes associated with rs61325379[chr16:87890614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More