EnhancerDB
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  3. rs61541205[chr12:52604705]
Enhancers that have rs61541205[chr12:52604705]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs61541205[chr12:52604705]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52604240 52604744 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546700
chr12 52604267 52604723 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546701
chr12 52604311 52604827 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546705
chr12 52604348 52604708 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546709
chr12 52604352 52604756 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546711
chr12 52604382 52604722 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546713
chr12 52604392 52604762 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546714
chr12 52604425 52604809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546715
chr12 52604534 52605416 ZNF143 GTRD no Epithelial (MCF-7) 21546718
chr12 52604645 52605482 ZNF143 GTRD no Epithelial (MCF-7) 21546719
chr12 52604694 52604709 TFAP2C JASPAR yes 120928471
chr12 52604695 52604713 ESR1 JASPAR yes 120928472
chr12 52604696 52604710 EBF1 JASPAR yes 120928473
chr12 52604697 52604708 EBF1 JASPAR yes 120928474
chr12 52604698 52604707 TFAP2A JASPAR yes 120928475
Genes associated with rs61541205[chr12:52604705], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More