EnhancerDB
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  3. rs62002090[chr15:42092326]
Enhancers that have rs62002090[chr15:42092326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42092129 42101461 enh16078
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Placenta Colon (HCT116) Thyroid Breast Uterus Heart
Transcript factors that have rs62002090[chr15:42092326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42091289 42093486 P63 GTRD no Skin (Keratinocyte) 21651256
chr15 42091289 42093486 P63 GTRD no Skin (Keratinocyte) 108135187
chr15 42091476 42092945 ZNF274 GTRD no Cervix (HeLa-S3) 21651262
chr15 42091476 42092945 ZNF274 GTRD no Cervix (HeLa-S3) 21651263
chr15 42091476 42092945 ZNF274 GTRD no Cervix (HeLa-S3) 108135195
chr15 42091501 42092672 P63 GTRD no Skin (Keratinocyte) 21651264
chr15 42091501 42092672 P63 GTRD no Skin (Keratinocyte) 108135197
chr15 42091523 42094030 ZNF274 GTRD no Cervix (HeLa-S3) 21651265
chr15 42091523 42094030 ZNF274 GTRD no Cervix (HeLa-S3) 21651266
chr15 42091523 42094030 ZNF274 GTRD no Cervix (HeLa-S3) 108135198
chr15 42091597 42093569 ZNF274 GTRD no Cervix (HeLa-S3) 21651268
chr15 42091597 42093569 ZNF274 GTRD no Cervix (HeLa-S3) 21651269
chr15 42091597 42093569 ZNF274 GTRD no Cervix (HeLa-S3) 108135200
chr15 42091600 42093022 ZNF274 GTRD no Cervix (HeLa-S3) 21651270
chr15 42091600 42093022 ZNF274 GTRD no Cervix (HeLa-S3) 21651271
chr15 42091600 42093022 ZNF274 GTRD no Cervix (HeLa-S3) 108135201
chr15 42091632 42092391 ZNF274 GTRD no Liver (HepG2) 21651273
chr15 42091632 42092391 ZNF274 GTRD no Liver (HepG2) 108135204
chr15 42091640 42092842 ZNF274 GTRD no Cervix (HeLa-S3) 21651275
chr15 42091640 42092842 ZNF274 GTRD no Cervix (HeLa-S3) 21651276
chr15 42091640 42092842 ZNF274 GTRD no Cervix (HeLa-S3) 108135206
chr15 42092321 42092341 RREB1 JASPAR yes 23001321
chr15 42092322 42092332 SP1 JASPAR yes 23001322
chr15 42092323 42092333 SP1 JASPAR yes 23001323
chr15 42092323 42092343 RREB1 JASPAR yes 23001324
Genes associated with rs62002090[chr15:42092326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr15 42120283 42129779 + JMJD7 ENSG00000243789.6 42120283 27957 Heart 7.95073e-15 13844