EnhancerDB
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  3. rs62011287[chr15:63791228]
Enhancers that have rs62011287[chr15:63791228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 63763165 63791495 enh16225
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1)
chr15 63791190 63791462 vista20284
VISTA
Transcript factors that have rs62011287[chr15:63791228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 63791001 63791810 ZBTB33 GTRD no Lung (A549) 108144236
chr15 63791124 63791591 ZNF143 GTRD no Epithelial (MCF-7) 21658967
chr15 63791124 63791591 ZNF143 GTRD no Epithelial (MCF-7) 108144237
chr15 63791134 63791621 ZNF143 GTRD no Epithelial (MCF-7) 21658968
chr15 63791134 63791621 ZNF143 GTRD no Epithelial (MCF-7) 108144238
chr15 63791143 63791745 ZNF274 GTRD no Cervix (HeLa-S3) 21658969
chr15 63791143 63791745 ZNF274 GTRD no Cervix (HeLa-S3) 108144239
chr15 63791145 63791691 ZNF143 GTRD no Epithelial (MCF-7) 21658970
chr15 63791145 63791691 ZNF143 GTRD no Epithelial (MCF-7) 108144240
chr15 63791158 63791566 ZNF274 GTRD no Cervix (HeLa-S3) 21658971
chr15 63791158 63791566 ZNF274 GTRD no Cervix (HeLa-S3) 108144241
chr15 63791165 63791693 ZNF143 GTRD no Epithelial (MCF-7) 21658972
chr15 63791165 63791693 ZNF143 GTRD no Epithelial (MCF-7) 108144242
chr15 63791173 63791665 ZBTB33 GTRD no Lung (A549) 108144243
chr15 63791180 63791705 ZBTB33 GTRD no Brain (SK-N-SH) 21658973
chr15 63791180 63791705 ZBTB33 GTRD no Brain (SK-N-SH) 108144244
chr15 63791186 63791631 ZNF274 GTRD no Liver (HepG2) 21658974
chr15 63791186 63791631 ZNF274 GTRD no Liver (HepG2) 108144245
chr15 63791223 63791231 TBX5 JASPAR yes 23984584
chr15 63791223 63791231 TBX5 JASPAR yes 70538764
chr15 63791228 63791231 MYB TRANSFAC yes 23984585
chr15 63791228 63791231 MYB TRANSFAC yes 70538765
Genes associated with rs62011287[chr15:63791228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More