EnhancerDB
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  3. rs62046564[chr16:81531596]
Enhancers that have rs62046564[chr16:81531596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81497085 81541782 enh4149
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs62046564[chr16:81531596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81531589 81531607 IRF2 JASPAR yes 11835948
chr16 81531590 81531611 IRF1 JASPAR yes 11835949
chr16 81531592 81531607 STAT2 JASPAR yes 11835950
chr16 81531593 81531607 STAT1 JASPAR yes 11835951
chr16 81531594 81531606 IRF1 JASPAR yes 11835952
chr16 81531594 81531608 IRF7 JASPAR yes 11835953
chr16 81531594 81531608 IRF8 JASPAR yes 11835954
chr16 81531594 81531609 IRF9 JASPAR yes 11835955
chr16 81531595 81531613 IRF2 JASPAR yes 11835956
chr16 81531596 81531617 IRF1 JASPAR yes 11835957
Genes associated with rs62046564[chr16:81531596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 81348557 81424489 + GAN ENSG00000261609.3 81348557 107107 Esophagus 0.0830497 15100