EnhancerDB
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  3. rs62048390[chr16:85548028]
Enhancers that have rs62048390[chr16:85548028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62048390[chr16:85548028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85547686 85548286 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21726739
chr16 85547967 85548563 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21726740
chr16 85548009 85548393 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21726741
chr16 85548021 85548237 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21726742
chr16 85548025 85548401 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21726743
Genes associated with rs62048390[chr16:85548028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More