EnhancerDB
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Enhancers that have rs62050027[chr16:85597884]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62050027[chr16:85597884]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85597613 85597903 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729311
chr16 85597651 85597921 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729312
chr16 85597708 85598031 ZNF274 GTRD no Liver (HepG2) 21729313
chr16 85597877 85597898 ZNF263 JASPAR yes 12077130
chr16 85597878 85597885 CEBPA TRANSFAC yes 12077131
chr16 85597879 85597890 E2F6 JASPAR yes 12077132
chr16 85597881 85597902 ZNF263 JASPAR yes 12077133
chr16 85597884 85597890 PEA3 TRANSFAC yes 12077134
chr16 85597884 85597905 ZNF263 JASPAR yes 12077135
Genes associated with rs62050027[chr16:85597884], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More