EnhancerDB
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  3. rs62052820[chr16:69575238]
Enhancers that have rs62052820[chr16:69575238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69559096 69575635 enh4114
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs62052820[chr16:69575238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69575222 69575240 NR3C1 JASPAR yes 11279618
chr16 69575232 69575238 ETS1 JASPAR yes 11279619
chr16 69575232 69575238 SPI1 JASPAR yes 11279620
chr16 69575236 69575257 IRF1 JASPAR yes 11279621
chr16 69575238 69575253 IRF9 JASPAR yes 11279622
Genes associated with rs62052820[chr16:69575238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More