EnhancerDB
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  3. rs62060387[chr17:55456724]
Enhancers that have rs62060387[chr17:55456724]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55440094 55459475 enh17241
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 55456674 55456859 vista25227
VISTA
Transcript factors that have rs62060387[chr17:55456724]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55448417 55457368 ZBTB33 GTRD no Lung (A549) 108273940
chr17 55448498 55457254 ZBTB33 GTRD no Lung (A549) 108273941
chr17 55454241 55457413 TEF1 GTRD no Bone (Osteoblast) 108273942
chr17 55454357 55457240 ZBTB33 GTRD no Lung (A549) 108273943
chr17 55456278 55456738 ZNF143 GTRD no Epithelial (MCF-7) 21773485
chr17 55456278 55456738 ZNF143 GTRD no Epithelial (MCF-7) 108273945
chr17 55456310 55456762 ZNF274 GTRD no Cervix (HeLa-S3) 21773487
chr17 55456310 55456762 ZNF274 GTRD no Cervix (HeLa-S3) 108273947
chr17 55456442 55457181 ZNF274 GTRD no Blood (GM12878) 21773489
chr17 55456442 55457181 ZNF274 GTRD no Blood (GM12878) 108273949
chr17 55456566 55457116 ZNF274 GTRD no Blood (GM12878) 21773490
chr17 55456566 55457116 ZNF274 GTRD no Blood (GM12878) 108273950
chr17 55456582 55457466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773491
chr17 55456582 55457466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273951
chr17 55456606 55457074 ZNF274 GTRD no Blood (GM12878) 21773492
chr17 55456606 55457074 ZNF274 GTRD no Blood (GM12878) 108273952
chr17 55456676 55457102 ZNF143 GTRD no Epithelial (MCF-7) 21773493
chr17 55456676 55457102 ZNF143 GTRD no Epithelial (MCF-7) 108273953
chr17 55456694 55457050 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773494
chr17 55456694 55457050 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108273954
chr17 55456697 55457062 EP300 UCSC Txn Factor no Conserved 108273955
chr17 55456701 55456984 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773495
chr17 55456701 55456984 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108273956
chr17 55456717 55456997 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21773496
chr17 55456717 55456997 MAFF UCSC Txn Factor no Conserved 108273957
chr17 55456717 55456997 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273958
Genes associated with rs62060387[chr17:55456724], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More