EnhancerDB
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  3. rs62069379[chr17:78760645]
Enhancers that have rs62069379[chr17:78760645]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs62069379[chr17:78760645]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78760637 78760648 HOXA10 JASPAR yes 56279448
chr17 78760637 78760648 HOXC11 JASPAR yes 56279449
chr17 78760637 78760648 HOXC12 JASPAR yes 56279450
chr17 78760637 78760648 HOXC13 JASPAR yes 56279451
chr17 78760637 78760648 HOXD12 JASPAR yes 56279452
chr17 78760638 78760647 CDX1 JASPAR yes 56279453
chr17 78760638 78760648 HOXA13 JASPAR yes 56279454
chr17 78760638 78760648 HOXC10 JASPAR yes 56279455
chr17 78760638 78760648 HOXD11 JASPAR yes 56279456
Genes associated with rs62069379[chr17:78760645], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More