EnhancerDB
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  3. rs62073286[chr17:62988405]
Enhancers that have rs62073286[chr17:62988405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62073286[chr17:62988405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 21780807
chr17 62985563 62989044 ZNF143 GTRD no Epithelial (MCF-7) 108283232
chr17 62988358 62988934 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780864
chr17 62988360 62989020 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780865
chr17 62988371 62988747 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780866
chr17 62988376 62988916 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780867
chr17 62988392 62988962 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780868
chr17 62988395 62988411 NFYA JASPAR yes 55336434
chr17 62988398 62988413 NFYB JASPAR yes 55336435
chr17 62988400 62988405 NFY TRANSFAC yes 55336436
chr17 62988403 62988659 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780869
chr17 62988404 62988888 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780870
Genes associated with rs62073286[chr17:62988405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More