EnhancerDB
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  3. rs62078276[chr17:75096887]
Enhancers that have rs62078276[chr17:75096887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75089705 75123925 enh17395
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62078276[chr17:75096887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75095748 75096945 TCF7L2 GTRD no Colon (HCT116) 21789402
chr17 75095748 75096945 TCF7L2 GTRD no Colon (HCT116) 108296689
chr17 75095814 75097548 ZBTB33 GTRD no Lung (A549) 108296694
chr17 75095892 75097133 TCF7L2 GTRD no Colon (HCT116) 21789419
chr17 75095892 75097133 TCF7L2 GTRD no Colon (HCT116) 108296732
chr17 75096880 75096892 HLF JASPAR yes 56040893
chr17 75096882 75096890 GMEB2 JASPAR yes 56040894
chr17 75096882 75096893 NFIL3 JASPAR yes 56040895
Genes associated with rs62078276[chr17:75096887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More