EnhancerDB
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  3. rs62078284[chr17:75123409]
Enhancers that have rs62078284[chr17:75123409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75089705 75123925 enh17395
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62078284[chr17:75123409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75122684 75126226 TCF7L2 GTRD no Colon (HCT116) 21789834
chr17 75122684 75126226 TCF7L2 GTRD no Colon (HCT116) 108297383
chr17 75122684 75126226 TCF7L2 GTRD no Colon (HCT116) 108297384
chr17 75122973 75126463 TCF7L2 GTRD no Colon (HCT116) 21789835
chr17 75122973 75126463 TCF7L2 GTRD no Colon (HCT116) 108297385
chr17 75122973 75126463 TCF7L2 GTRD no Colon (HCT116) 108297386
chr17 75123127 75125596 ZBTB33 GTRD no Lung (A549) 108297387
chr17 75123127 75125596 ZBTB33 GTRD no Lung (A549) 108297388
chr17 75123318 75125682 ZBTB33 GTRD no Lung (A549) 108297389
chr17 75123318 75125682 ZBTB33 GTRD no Lung (A549) 108297390
chr17 75123370 75125670 ZBTB33 GTRD no Lung (A549) 108297391
chr17 75123370 75125670 ZBTB33 GTRD no Lung (A549) 108297392
chr17 75123385 75132341 ZBTB33 GTRD no Lung (A549) 108297393
chr17 75123385 75132341 ZBTB33 GTRD no Lung (A549) 108297394
chr17 75123400 75123418 SRF JASPAR yes 56044797
chr17 75123404 75123414 HOXA13 JASPAR yes 56044798
chr17 75123404 75123414 HOXB13 JASPAR yes 56044799
chr17 75123404 75123414 HOXD13 JASPAR yes 56044800
chr17 75123404 75123415 HOXA10 JASPAR yes 56044801
chr17 75123405 75123414 CDX1 JASPAR yes 56044802
chr17 75123405 75123416 CDX2 JASPAR yes 56044803
chr17 75123405 75123416 RUNX1 JASPAR yes 56044804
Genes associated with rs62078284[chr17:75123409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More