EnhancerDB
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Enhancers that have rs62080698[chr17:41535580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs62080698[chr17:41535580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41534686 41538133 ZNF143 GTRD no Epithelial (MCF-7) 21760699
chr17 41534689 41535730 ZBTB33 GTRD no Lung (A549) 21760700
chr17 41534724 41535747 ZBTB33 GTRD no Lung (A549) 21760701
chr17 41534799 41537564 ZNF143 GTRD no Epithelial (MCF-7) 21760702
chr17 41534809 41537800 ZNF143 GTRD no Epithelial (MCF-7) 21760704
chr17 41534856 41538428 ZNF143 GTRD no Epithelial (MCF-7) 21760708
chr17 41534894 41538368 ZNF143 GTRD no Epithelial (MCF-7) 21760713
chr17 41534940 41537493 ZNF143 GTRD no Epithelial (MCF-7) 21760719
chr17 41534995 41537422 ZNF143 GTRD no Epithelial (MCF-7) 21760723
chr17 41535019 41538411 ZNF143 GTRD no Epithelial (MCF-7) 21760725
chr17 41535092 41535596 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21760726
chr17 41535098 41537986 ZNF143 GTRD no Epithelial (MCF-7) 21760727
chr17 41535167 41535707 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21760728
chr17 41535167 41537784 ZNF143 GTRD no Epithelial (MCF-7) 21760729
chr17 41535182 41535585 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760730
chr17 41535214 41535670 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760732
chr17 41535234 41535604 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760736
chr17 41535242 41535618 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760737
chr17 41535253 41535637 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760738
chr17 41535257 41535833 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21760739
chr17 41535259 41535663 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760740
chr17 41535267 41535771 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760742
chr17 41535271 41535601 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760743
chr17 41535292 41535688 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760746
chr17 41535307 41535847 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21760747
chr17 41535340 41537628 ZNF143 GTRD no Epithelial (MCF-7) 21760749
chr17 41535410 41535730 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760752
chr17 41535410 41536713 ZNF143 GTRD no Epithelial (MCF-7) 21760753
chr17 41535455 41535731 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760754
chr17 41535458 41536034 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21760755
chr17 41535463 41535867 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760756
chr17 41535469 41535973 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760757
chr17 41535470 41535934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760758
chr17 41535478 41537697 ZNF143 GTRD no Epithelial (MCF-7) 21760759
chr17 41535510 41537779 ZNF143 GTRD no Epithelial (MCF-7) 21760760
chr17 41535533 41537670 ZNF143 GTRD no Epithelial (MCF-7) 21760761
chr17 41535553 41537381 ZNF143 GTRD no Epithelial (MCF-7) 21760762
chr17 41535561 41535581 RREB1 JASPAR yes 54349476
chr17 41535563 41535583 RREB1 JASPAR yes 54349477
chr17 41535565 41535585 RREB1 JASPAR yes 54349478
chr17 41535566 41536596 ZNF143 GTRD no Epithelial (MCF-7) 21760763
chr17 41535567 41535587 RREB1 JASPAR yes 54349479
chr17 41535569 41535589 RREB1 JASPAR yes 54349480
chr17 41535570 41536771 ZNF143 GTRD no Epithelial (MCF-7) 21760764
chr17 41535571 41535591 RREB1 JASPAR yes 54349481
chr17 41535573 41535593 RREB1 JASPAR yes 54349482
Genes associated with rs62080698[chr17:41535580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More