EnhancerDB
  1. Home
  2. SNP
  3. rs62109899[chr19:13147100]
Enhancers that have rs62109899[chr19:13147100]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62109899[chr19:13147100]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13146790 13147752 ZNF274 GTRD no Bone Marrow (K562) 108387596
chr19 13146831 13147752 ZNF274 GTRD no Bone Marrow (K562) 108387597
chr19 13146855 13147861 ZNF274 GTRD no Bone Marrow (K562) 108387598
chr19 13146884 13147923 TCF7L2 GTRD no Colon (HCT116) 21850234
chr19 13146884 13147923 TCF7L2 GTRD no Colon (HCT116) 108387599
chr19 13146926 13147738 ZNF274 GTRD no Bone Marrow (K562) 108387600
chr19 13147013 13147614 CTCF UCSC Txn Factor no Conserved 108387601
chr19 13147039 13147611 ZNF274 GTRD no Bone Marrow (K562) 108387602
chr19 13147039 13147656 ZNF274 GTRD no Blood (GM12878) 108387603
chr19 13147077 13147662 ZNF274 GTRD no Bone Marrow (K562) 108387604
Genes associated with rs62109899[chr19:13147100], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 12203078 12248050 + ZNF788 ENSG00000214189.4 12203078 899050 Lung 0.329396 17065
chr19 12500830 12512085 - ZNF799 ENSG00000196466.6 12512085 635015 Stomach 0.00398039 17075