EnhancerDB
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  3. rs62109929[chr19:13274526]
Enhancers that have rs62109929[chr19:13274526]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62109929[chr19:13274526]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389190
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389191
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389192
chr19 13273985 13274601 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108389329
chr19 13273985 13274601 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108389330
chr19 13274184 13274594 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108389335
chr19 13274184 13274594 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108389336
chr19 13274196 13274720 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21850988
chr19 13274196 13274720 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108389337
chr19 13274235 13275721 ZNF274 GTRD no Blood (GM12878) 21850989
chr19 13274235 13275721 ZNF274 GTRD no Blood (GM12878) 108389338
chr19 13274235 13275721 ZNF274 GTRD no Blood (GM12878) 108389339
chr19 13274246 13274762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21850990
chr19 13274246 13274762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108389340
chr19 13274290 13274914 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21850991
chr19 13274290 13274914 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108389341
chr19 13274296 13274776 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21850992
chr19 13274296 13274776 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108389342
chr19 13274322 13275630 ZNF274 GTRD no Blood (GM12878) 21850993
chr19 13274322 13275630 ZNF274 GTRD no Blood (GM12878) 108389343
chr19 13274322 13275630 ZNF274 GTRD no Blood (GM12878) 108389344
chr19 13274355 13274931 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21850994
chr19 13274355 13274931 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108389345
chr19 13274400 13275518 ZNF274 GTRD no Bone Marrow (K562) 21850995
chr19 13274400 13275518 ZNF274 GTRD no Bone Marrow (K562) 108389346
chr19 13274400 13275518 ZNF274 GTRD no Bone Marrow (K562) 108389347
chr19 13274409 13274913 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850996
chr19 13274409 13274913 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389348
chr19 13274415 13274592 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108389349
chr19 13274433 13274949 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850997
chr19 13274433 13274949 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389350
chr19 13274440 13275866 ZNF274 GTRD no Blood (GM12878) 21850998
chr19 13274440 13275866 ZNF274 GTRD no Blood (GM12878) 108389351
chr19 13274440 13275866 ZNF274 GTRD no Blood (GM12878) 108389352
chr19 13274445 13274975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850999
chr19 13274445 13274975 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389353
chr19 13274453 13275741 ZNF274 GTRD no Blood (GM12878) 21851000
chr19 13274453 13275741 ZNF274 GTRD no Blood (GM12878) 108389354
chr19 13274453 13275741 ZNF274 GTRD no Blood (GM12878) 108389355
chr19 13274457 13275002 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851001
chr19 13274457 13275002 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389356
chr19 13274460 13274820 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851002
chr19 13274460 13274820 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108389357
chr19 13274471 13274821 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851003
chr19 13274471 13274821 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108389358
chr19 13274475 13274875 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851004
chr19 13274475 13274875 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108389359
chr19 13274483 13274959 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851005
chr19 13274483 13274959 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389360
chr19 13274484 13274974 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108389361
chr19 13274490 13274846 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108389362
chr19 13274499 13274809 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108389363
chr19 13274525 13275483 ZBTB33 GTRD no Lung (A549) 108389364
chr19 13274525 13275483 ZBTB33 GTRD no Lung (A549) 108389365
Genes associated with rs62109929[chr19:13274526], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More