EnhancerDB
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  3. rs62109933[chr19:13285508]
Enhancers that have rs62109933[chr19:13285508]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62109933[chr19:13285508]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13284849 13285564 ZNF143 GTRD no Epithelial (MCF-7) 21851465
chr19 13284913 13285807 ZNF143 GTRD no Epithelial (MCF-7) 21851468
chr19 13285277 13285982 ZNF274 GTRD no Bone Marrow (K562) 21851475
chr19 13285370 13285864 ZNF274 GTRD no Bone Marrow (K562) 21851476
chr19 13285391 13286020 TCF7L2 GTRD no Colon (HCT116) 21851477
chr19 13285503 13285513 SP1 JASPAR yes 112515977
chr19 13285503 13285522 PAX5 JASPAR yes 112515978
chr19 13285504 13285912 ZNF274 GTRD no Bone Marrow (K562) 21851478
chr19 13285506 13285511 SP1 TRANSFAC yes 112515979
Genes associated with rs62109933[chr19:13285508], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More