EnhancerDB
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  3. rs62121717[chr19:2552017]
Enhancers that have rs62121717[chr19:2552017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62121717[chr19:2552017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2552015 2552026 E2F4 JASPAR yes 112073697
chr19 2552015 2552026 E2F6 JASPAR yes 112073698
chr19 2552015 2552029 E2F7 JASPAR yes 112073699
chr19 2552017 2552031 PAX6 JASPAR yes 112073700
Genes associated with rs62121717[chr19:2552017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More