EnhancerDB
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  3. rs62129770[chr2:28858472]
Enhancers that have rs62129770[chr2:28858472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 28858256 28858580 vista30853
VISTA
Transcript factors that have rs62129770[chr2:28858472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28858464 28858479 RFX5 JASPAR yes 22025914
chr2 28858464 28858479 RFX5 JASPAR yes 72662061
chr2 28858468 28858484 ZNF143 JASPAR yes 22025915
chr2 28858468 28858484 ZNF143 JASPAR yes 72662062
Genes associated with rs62129770[chr2:28858472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More