EnhancerDB
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  3. rs62139017[chr2:27960776]
Enhancers that have rs62139017[chr2:27960776]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr2 27960575 27961156 vista30789
VISTA
Transcript factors that have rs62139017[chr2:27960776]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27960772 27960791 CTCF JASPAR yes 22022616
chr2 27960772 27960791 CTCF JASPAR yes 72587470
chr2 27960776 27960790 ZIC1 JASPAR yes 22022617
chr2 27960776 27960790 ZIC1 JASPAR yes 72587471
chr2 27960776 27960791 ZIC3 JASPAR yes 22022618
chr2 27960776 27960791 ZIC4 JASPAR yes 22022619
chr2 27960776 27960791 ZIC3 JASPAR yes 72587472
chr2 27960776 27960791 ZIC4 JASPAR yes 72587473
Genes associated with rs62139017[chr2:27960776], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More