EnhancerDB
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  3. rs62142583[chr2:38735642]
Enhancers that have rs62142583[chr2:38735642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38731025 38748315 enh5426
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung Blood (OCI-LY7) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Spleen Uterus Heart
chr2 38735582 38735946 vista31119
VISTA
Transcript factors that have rs62142583[chr2:38735642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38735466 38736114 CTCF UCSC Txn Factor no Conserved 108431898
chr2 38735502 38735898 MAX UCSC Txn Factor no Conserved 108431899
chr2 38735523 38735809 SMC3 UCSC Txn Factor no Conserved 108431900
chr2 38735533 38735797 RAD21 UCSC Txn Factor no Conserved 108431901
chr2 38735544 38735784 FOXA1 UCSC Txn Factor no Conserved 108431902
chr2 38735641 38735645 NFE TRANSFAC yes 22038459
chr2 38735641 38735645 NFE TRANSFAC yes 73147837
chr2 38735642 38735647 GATA2 JASPAR yes 22038460
chr2 38735642 38735647 GATA2 JASPAR yes 73147838
Genes associated with rs62142583[chr2:38735642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr2 39208537 39351486 - SOS1 ENSG00000115904.8 39351486 472895 Adrenal 0.193375 2296