EnhancerDB
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  3. rs62197740[chr2:187436353]
Enhancers that have rs62197740[chr2:187436353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 187431485 187444519 enh19065
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs62197740[chr2:187436353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 187436344 187436363 PAX5 JASPAR yes 79477718
chr2 187436345 187436353 TBX5 JASPAR yes 79477719
chr2 187436345 187436354 ZEB1 JASPAR yes 79477720
chr2 187436345 187436358 ZBTB18 JASPAR yes 79477721
chr2 187436346 187436356 ID4 JASPAR yes 79477722
chr2 187436346 187436356 TCF3 JASPAR yes 79477723
chr2 187436346 187436356 TCF4 JASPAR yes 79477724
chr2 187436348 187436353 USF2 TRANSFAC yes 79477725
chr2 187436352 187436367 MEF2A JASPAR yes 79477726
chr2 187436353 187436368 MEF2C JASPAR yes 79477727
Genes associated with rs62197740[chr2:187436353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More